Article-Journal

MAFcounter: an efficient tool for counting the occurrences of k-mers in MAF files

Leveraging sequences missing from the human genome to diagnose cancer

Developed a novel cancer detection method using sequences absent from the human genome, demonstrating potential for liquid biopsy-based diagnostics.

Leveraging sequences missing from the human genome to diagnose cancer

Landscape and mutational dynamics of G-quadruplexes in the complete human genome and in haplotypes of diverse ancestry

KmerCrypt: private k-mer search with homomorphic encryption

invertiaDB: a database of inverted repeats across organismal genomes

Identification of the shortest species-specific oligonucleotide sequences

Utilizing nullomers in cell-free RNA for early cancer detection

The determinants of the rarity of nucleic and peptide short sequences in nature

Peptide absent sequences emerging in human cancers