Identification of the shortest species-specific oligonucleotide sequences
Identified the shortest species-specific oligonucleotide sequences across the tree of life, enabling efficient molecular diagnostics and species authentication.
ZSeeker: an optimized algorithm for Z-DNA detection in genomic sequences
Published Zseeker, an open-source Python tool for optimized Z-DNA detection in genomic sequences, enabling large-scale analysis of non-B DNA structures.
G. wang
Leveraging sequences missing from the human genome to diagnose cancer
Developed a novel cancer detection method using sequences absent from the human genome, demonstrating potential for liquid biopsy-based diagnostics.
I. georgakopoulos soares
kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species
Developed kmerDB, a comprehensive database consolidating DNA and protein k-mer sequences across Genbank and UniProt for species-level sequence analysis.