Publications | Ioannis Mouratidis

Identification of the shortest species-specific oligonucleotide sequences

Sat, 01 Feb 2025 00:00:00 +0000

This work provides a comprehensive catalog of minimal species-specific sequences with applications in diagnostics, environmental monitoring, and food authentication.

Leveraging sequences missing from the human genome to diagnose cancer

Wed, 01 Jan 2025 00:00:00 +0000

This work demonstrates how sequences that are absent from the human genome can be leveraged as biomarkers for cancer detection, with potential applications in liquid biopsy-based diagnostics.

ZSeeker: an optimized algorithm for Z-DNA detection in genomic sequences

Wed, 01 Jan 2025 00:00:00 +0000

ZSeeker provides researchers with a fast and accurate tool for identifying Z-DNA forming sequences across entire genomes, facilitating studies of genome regulation and stability.

kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species

Mon, 01 Jan 2024 00:00:00 +0000

kmerDB provides the research community with a powerful tool for k-mer based species identification, comparative genomics, and evolutionary studies.