ZSeeker: an optimized algorithm for Z-DNA detection in genomic sequences
Published Zseeker, an open-source Python tool for optimized Z-DNA detection in genomic sequences, enabling large-scale analysis of non-B DNA structures.
G. wang
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1 min read
Leveraging sequences missing from the human genome to diagnose cancer
Developed a novel cancer detection method using sequences absent from the human genome, demonstrating potential for liquid biopsy-based diagnostics.
I. georgakopoulos soares
Genomic Data Compression Tool
Novel C++ and Python compression tool for genomic file formats achieving 10-20% smaller files and 50-70% faster compression
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1 min read
kmerDB: A database encompassing the set of genomic and proteomic sequence information for each species
Developed kmerDB, a comprehensive database consolidating DNA and protein k-mer sequences across Genbank and UniProt for species-level sequence analysis.
kmerDB
Comprehensive database consolidating genomic and proteomic k-mer information across all species
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1 min read